imports not written about pyforest HOT 12 CLOSED

@bensdm and @tushargoyal22
I have created a new release 1.0.3. Is the problem solved now?

pip install --upgrade pyforest
python -m pyforest install_extensions

from pyforest.

Hi Benoit,

thank you for your message. Your first error is caused by the second error. Because if the extension is not installed, pyforest cannot add the imports to the top. So, we need to fix the second error.
That error seems to be related to your environment. Therefore, it is important, that you let us know how exactly you installed pyforest. Also, how do you have installed python on your computer?

Thank you,
Florian

from pyforest.

Hi 8080labs, i am using conda and have installed pyforest using pip install pyforest inside my env, don't know why when running python -m pyforest install_extensions it looks for the package in usr/bin/python, while if i just run python it is running inside my env

from pyforest.

Hi Benoit,

what do you get when you type which python in your env?

from pyforest.

i get the expected python path /home/usr/anaconda3/envs/main/bin/python

from pyforest.

Alright. You can also install the pyforest extensions using pyforest with

import pyforest
pyforest.install_extensions()

Does that do the trick for you?

from pyforest.

i got this issue [Errno 13] Permission denied: '/usr/local/share/jupyter'

from pyforest.

Could you fill out the issue template you see when you open a new issue? I have the feeling we need some more information to tackle that issue.

from pyforest.

• Operating System: Linux Ubuntu 18.04.4 LTS
• Python Version: Python 3.7.4
• How did you install pyforest: pip
• Python packages:
  _ipyw_jlab_nb_ext_conf 0.1.0 py37_0
  _libgcc_mutex 0.1 main
  _tflow_select 2.3.0 mkl
  absl-py 0.8.1 py37_0
  alabaster 0.7.12 py37_0
  altair 4.0.1 pypi_0 pypi
  anaconda 2019.10 py37_0
  anaconda-client 1.7.2 py37_0
  anaconda-navigator 1.9.7 py37_0
  anaconda-project 0.8.3 py_0
  asn1crypto 1.0.1 py37_0
  astor 0.8.0 py37_0
  astroid 2.3.1 py37_0
  astropy 3.2.2 py37h7b6447c_0
  atari-py 0.2.6 pypi_0 pypi
  atomicwrites 1.3.0 py37_1
  attrs 19.2.0 py_0
  babel 2.7.0 py_0
  backcall 0.1.0 py37_0
  backports 1.0 py_2
  backports.functools_lru_cache 1.5 py_2
  backports.os 0.1.1 py37_0
  backports.shutil_get_terminal_size 1.0.0 py37_2
  backports.tempfile 1.0 py_1
  backports.weakref 1.0.post1 py_1
  base58 2.0.0 pypi_0 pypi
  beautifulsoup4 4.8.0 py37_0
  bitarray 1.0.1 py37h7b6447c_0
  bkcharts 0.2 py37_0
  blas 1.0 mkl
  bleach 3.1.0 py37_0
  blinker 1.4 pypi_0 pypi
  blosc 1.16.3 hd408876_0
  bokeh 1.3.4 py37_0
  boto 2.49.0 py37_0
  boto3 1.12.5 pypi_0 pypi
  botocore 1.15.5 pypi_0 pypi
  bottleneck 1.2.1 py37h035aef0_1
  bzip2 1.0.8 h7b6447c_0
  c-ares 1.15.0 h7b6447c_1001
  ca-certificates 2019.8.28 0
  cairo 1.14.12 h8948797_3
  certifi 2019.9.11 py37_0
  cffi 1.12.3 py37h2e261b9_0
  chardet 3.0.4 py37_1003
  click 7.0 py37_0
  cloudpickle 1.2.2 py_0
  clyent 1.2.2 py37_1
  colorama 0.4.1 py37_0
  conda-package-handling 1.6.0 py37h7b6447c_0
  conda-verify 3.4.2 py_1
  contextlib2 0.6.0 py_0
  creme 0.4.4 pypi_0 pypi
  cryptography 2.7 py37h1ba5d50_0
  curl 7.65.3 hbc83047_0
  cycler 0.10.0 py37_0
  cython 0.29.13 py37he6710b0_0
  cytoolz 0.10.0 py37h7b6447c_0
  dash 1.9.0 pypi_0 pypi
  dash-core-components 1.8.0 pypi_0 pypi
  dash-daq 0.3.3 pypi_0 pypi
  dash-html-components 1.0.2 pypi_0 pypi
  dash-renderer 1.2.4 pypi_0 pypi
  dash-table 4.6.0 pypi_0 pypi
  dask 2.5.2 py_0
  dask-core 2.5.2 py_0
  dbus 1.13.6 h746ee38_0
  decorator 4.4.0 py37_1
  defusedxml 0.6.0 py_0
  distributed 2.5.2 py_0
  docutils 0.15.2 py37_0
  dtale 1.7.6 pypi_0 pypi
  entrypoints 0.3 py37_0
  enum-compat 0.0.3 pypi_0 pypi
  et_xmlfile 1.0.1 py37_0
  expat 2.2.6 he6710b0_0
  fastcache 1.1.0 py37h7b6447c_0
  filelock 3.0.12 py_0
  flask 1.1.1 py_0
  flask-compress 1.4.0 pypi_0 pypi
  fontconfig 2.13.0 h9420a91_0
  freetype 2.9.1 h8a8886c_1
  fribidi 1.0.5 h7b6447c_0
  fsspec 0.5.2 py_0
  future 0.17.1 py37_0
  gast 0.2.2 py37_0
  get_terminal_size 1.0.0 haa9412d_0
  gevent 1.4.0 py37h7b6447c_0
  glib 2.56.2 hd408876_0
  glob2 0.7 py_0
  gmp 6.1.2 h6c8ec71_1
  gmpy2 2.0.8 py37h10f8cd9_2
  google-pasta 0.1.8 py_0
  graphite2 1.3.13 h23475e2_0
  graphviz 2.40.1 h21bd128_2 anaconda
  greenlet 0.4.15 py37h7b6447c_0
  grpcio 1.16.1 py37hf8bcb03_1
  gst-plugins-base 1.14.0 hbbd80ab_1
  gstreamer 1.14.0 hb453b48_1
  gym 0.15.4 pypi_0 pypi
  h5py 2.9.0 py37h7918eee_0
  harfbuzz 1.8.8 hffaf4a1_0
  hdf5 1.10.4 hb1b8bf9_0
  heapdict 1.0.1 py_0
  html5lib 1.0.1 py37_0
  icu 58.2 h9c2bf20_1
  idna 2.8 py37_0
  imageio 2.6.0 py37_0
  imagesize 1.1.0 py37_0
  importlib_metadata 0.23 py37_0
  intel-openmp 2019.4 243
  ipykernel 5.1.2 py37h39e3cac_0
  ipython 7.8.0 py37h39e3cac_0
  ipython_genutils 0.2.0 py37_0
  ipywidgets 7.5.1 py_0
  isort 4.3.21 py37_0
  itsdangerous 1.1.0 py37_0
  jbig 2.1 hdba287a_0
  jdcal 1.4.1 py_0
  jedi 0.15.1 py37_0
  jeepney 0.4.1 py_0
  jinja2 2.10.3 py_0
  jmespath 0.9.4 pypi_0 pypi
  joblib 0.13.2 py37_0
  jpeg 9b h024ee3a_2
  json5 0.8.5 py_0
  jsonschema 3.0.2 py37_0
  jupyter 1.0.0 py37_7
  jupyter_client 5.3.3 py37_1
  jupyter_console 6.0.0 py37_0
  jupyter_core 4.5.0 py_0
  jupyterlab 1.1.4 pyhf63ae98_0
  jupyterlab_server 1.0.6 py_0
  kaggle 1.5.6 py37_1 conda-forge
  keras-applications 1.0.8 py_0
  keras-preprocessing 1.1.0 py_1
  keyring 18.0.0 py37_0
  kiwisolver 1.1.0 py37he6710b0_0
  krb5 1.16.1 h173b8e3_7
  lazy-object-proxy 1.4.2 py37h7b6447c_0
  libarchive 3.3.3 h5d8350f_5
  libcurl 7.65.3 h20c2e04_0
  libedit 3.1.20181209 hc058e9b_0
  libffi 3.2.1 hd88cf55_4
  libgcc-ng 9.1.0 hdf63c60_0
  libgfortran-ng 7.3.0 hdf63c60_0
  liblief 0.9.0 h7725739_2
  libpng 1.6.37 hbc83047_0
  libprotobuf 3.10.1 hd408876_0
  libsodium 1.0.16 h1bed415_0
  libssh2 1.8.2 h1ba5d50_0
  libstdcxx-ng 9.1.0 hdf63c60_0
  libtiff 4.0.10 h2733197_2
  libtool 2.4.6 h7b6447c_5
  libuuid 1.0.3 h1bed415_2
  libxcb 1.13 h1bed415_1
  libxml2 2.9.9 hea5a465_1
  libxslt 1.1.33 h7d1a2b0_0
  llvmlite 0.29.0 py37hd408876_0
  locket 0.2.0 py37_1
  lxml 4.4.1 py37hefd8a0e_0
  lz4 3.0.2 pypi_0 pypi
  lz4-c 1.8.1.2 h14c3975_0
  lzo 2.10 h49e0be7_2
  markdown 3.1.1 py37_0
  markupsafe 1.1.1 py37h7b6447c_0
  matplotlib 3.1.1 py37h5429711_0
  mccabe 0.6.1 py37_1
  mistune 0.8.4 py37h7b6447c_0
  mkl 2019.4 243
  mkl-service 2.3.0 py37he904b0f_0
  mkl_fft 1.0.14 py37ha843d7b_0
  mkl_random 1.1.0 py37hd6b4f25_0
  mock 3.0.5 py37_0
  more-itertools 7.2.0 py37_0
  mpc 1.1.0 h10f8cd9_1
  mpfr 4.0.1 hdf1c602_3
  mpmath 1.1.0 py37_0
  msgpack-python 0.6.1 py37hfd86e86_1
  multipledispatch 0.6.0 py37_0
  navigator-updater 0.2.1 py37_0
  nbconvert 5.6.0 py37_1
  nbformat 4.4.0 py37_0
  ncurses 6.1 he6710b0_1
  networkx 2.3 py_0
  nltk 3.4.5 py37_0
  nose 1.3.7 py37_2
  notebook 6.0.1 py37_0
  numba 0.45.1 py37h962f231_0
  numexpr 2.7.0 py37h9e4a6bb_0
  numpy 1.17.2 py37haad9e8e_0
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  olefile 0.46 py37_0
  opencv-python 4.1.2.30 pypi_0 pypi
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  packaging 19.2 py_0
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  pillow 6.2.0 py37h34e0f95_0
  pip 19.2.3 py37_0
  pixman 0.38.0 h7b6447c_0
  pkginfo 1.5.0.1 py37_0
  plotly 4.5.1 pypi_0 pypi
  pluggy 0.13.0 py37_0
  ply 3.11 py37_0
  prometheus_client 0.7.1 py_0
  prompt_toolkit 2.0.10 py_0
  protobuf 3.10.1 py37he6710b0_0
  psutil 5.6.3 py37h7b6447c_0
  ptyprocess 0.6.0 py37_0
  py 1.8.0 py37_0
  py-lief 0.9.0 py37h7725739_2
  pycodestyle 2.5.0 py37_0
  pycosat 0.6.3 py37h14c3975_0
  pycparser 2.19 py37_0
  pycrypto 2.6.1 py37h14c3975_9
  pycurl 7.43.0.3 py37h1ba5d50_0
  pydeck 0.2.1 pypi_0 pypi
  pyflakes 2.1.1 py37_0
  pyforest 1.0.2 pypi_0 pypi
  pyglet 1.3.2 pypi_0 pypi
  pygments 2.4.2 py_0
  pylint 2.4.2 py37_0
  pyodbc 4.0.27 py37he6710b0_0
  pyopenssl 19.0.0 py37_0
  pyparsing 2.4.2 py_0
  pyqt 5.9.2 py37h05f1152_2
  pyrsistent 0.15.4 py37h7b6447c_0
  pysocks 1.7.1 py37_0
  pytables 3.5.2 py37h71ec239_1
  pytest 5.2.1 py37_0
  pytest-arraydiff 0.3 py37h39e3cac_0
  pytest-astropy 0.5.0 py37_0
  pytest-doctestplus 0.4.0 py_0
  pytest-openfiles 0.4.0 py_0
  pytest-remotedata 0.3.2 py37_0
  python 3.7.4 h265db76_1
  python-dateutil 2.8.0 py37_0
  python-graphviz 0.13.2 py_0
  python-libarchive-c 2.8 py37_13
  python-slugify 4.0.0 py_0 conda-forge
  pytz 2019.3 py_0
  pywavelets 1.0.3 py37hdd07704_1
  pyyaml 5.1.2 py37h7b6447c_0
  pyzmq 18.1.0 py37he6710b0_0
  qt 5.9.7 h5867ecd_1
  qtawesome 0.6.0 py_0
  qtconsole 4.5.5 py_0
  qtpy 1.9.0 py_0
  readline 7.0 h7b6447c_5
  requests 2.22.0 py37_0
  retrying 1.3.3 pypi_0 pypi
  ripgrep 0.10.0 hc07d326_0
  rope 0.14.0 py_0
  ruamel_yaml 0.15.46 py37h14c3975_0
  s3transfer 0.3.3 pypi_0 pypi
  scikit-image 0.15.0 py37he6710b0_0
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  scipy 1.3.1 py37h7c811a0_0
  seaborn 0.9.0 py37_0
  secretstorage 3.1.1 py37_0
  send2trash 1.5.0 py37_0
  setuptools 41.4.0 py37_0
  simplegeneric 0.8.1 py37_2
  singledispatch 3.4.0.3 py37_0
  sip 4.19.8 py37hf484d3e_0
  six 1.12.0 py37_0
  snappy 1.1.7 hbae5bb6_3
  snowballstemmer 2.0.0 py_0
  sortedcollections 1.1.2 py37_0
  sortedcontainers 2.1.0 py37_0
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  sphinx 2.2.0 py_0
  sphinxcontrib 1.0 py37_1
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  sphinxcontrib-devhelp 1.0.1 py_0
  sphinxcontrib-htmlhelp 1.0.2 py_0
  sphinxcontrib-jsmath 1.0.1 py_0
  sphinxcontrib-qthelp 1.0.2 py_0
  sphinxcontrib-serializinghtml 1.1.3 py_0
  sphinxcontrib-websupport 1.1.2 py_0
  spyder 3.3.6 py37_0
  spyder-kernels 0.5.2 py37_0
  sqlalchemy 1.3.9 py37h7b6447c_0
  sqlite 3.30.0 h7b6447c_0
  statsmodels 0.10.1 py37hdd07704_0
  streamlit 0.56.0 pypi_0 pypi
  sympy 1.4 py37_0
  tbb 2019.4 hfd86e86_0
  tblib 1.4.0 py_0
  tensorboard 2.0.0 pyhb38c66f_1
  tensorflow 2.0.0 mkl_py37h66b46cc_0
  tensorflow-base 2.0.0 mkl_py37h9204916_0
  tensorflow-estimator 2.0.0 pyh2649769_0
  termcolor 1.1.0 py37_1
  terminado 0.8.2 py37_0
  testpath 0.4.2 py37_0
  text-unidecode 1.2 py_0 conda-forge
  tk 8.6.8 hbc83047_0
  toml 0.10.0 pypi_0 pypi
  toolz 0.10.0 py_0
  tornado 5.1.1 pypi_0 pypi
  tqdm 4.36.1 py_0
  traitlets 4.3.3 py37_0
  tzlocal 2.0.0 pypi_0 pypi
  unicodecsv 0.14.1 py37_0
  unidecode 1.1.1 py_0 conda-forge
  unixodbc 2.3.7 h14c3975_0
  urllib3 1.24.2 py37_0
  validators 0.14.2 pypi_0 pypi
  watchdog 0.10.2 pypi_0 pypi
  wcwidth 0.1.7 py37_0
  webencodings 0.5.1 py37_1
  werkzeug 0.16.0 py_0
  wheel 0.33.6 py37_0
  widgetsnbextension 3.5.1 py37_0
  wrapt 1.11.2 py37h7b6447c_0
  wurlitzer 1.0.3 py37_0
  xlrd 1.2.0 py37_0
  xlsxwriter 1.2.1 py_0
  xlwt 1.3.0 py37_0
  xz 5.2.4 h14c3975_4
  yaml 0.1.7 had09818_2
  zeromq 4.3.1 he6710b0_3
  zict 1.0.0 py_0
  zipp 0.6.0 py_0
  zlib 1.2.11 h7b6447c_3
  zstd 1.3.7 h0b5b093_0

from pyforest.

I am facing same problem

from pyforest.

This seems to be related to the way that Jupyter saves extensions in its internal folders on your machine. Maybe this gives you some hints on how to solve the issue? E.g. via running python as sudo? Or via changing your permissions on the mentioned folder?

Does the following code work for you from the terminal?

jupyter nbextension install --py pyforest --sys-prefix
jupyter nbextension enable --py pyforest --sys-prefix

Otherwise, can you install other packages with nbextensions? Like qgrid? https://github.com/quantopian/qgrid

from pyforest.

yes it is, thanks a lot

from pyforest.