Related Issues (20)
- Issue in compiling phylostratr results HOT 2
- Issues in compiling results
- Empty faa file for 1008392 produces error with diamond HOT 2
- strata_blast issue HOT 18
- [Question]NCBI nr database VS uniprot HOT 1
- BLAST Database error HOT 3
- qseqid problem HOT 8
- Error: 'classification' is not an exported object from 'namespace:taxizedb' HOT 1
- No alias or index file found
- Duplicated factor levels while calling stratify()
- Error when importing external blast results
- May I use Phylostratr to study the genomic phylostratigraphy of Mycobacterium tuberculosis?
- Error in readLines(con) : HTTP error 400. HOT 14
- Help!!!! HTTP 400 HOT 1
- Error in (function (fastafile, blastdb = "blastdb", verbose = FALSE) : Failed to make blast database blastdb/Araport11_genes.201606.pep.fasta In addition: Warning message: In system2("makeblastdb", stderr = TRUE, stdout = TRUE, args = c("-dbtype", : running command '"makeblastdb" -dbtype prot -in Araport11_genes.201606.pep.fasta -out blastdb/Araport11_genes.201606.pep.fasta' had status 1 HOT 10
- Error in if (class(strata) != "Strata") { : the condition has length > 1 HOT 1
- Error: The focal species is not present in UniProt HOT 3
- "ncbi_tree" function error: Error in x$id : $ operator is invalid for atomic vectors HOT 1
- Error in `sql_integer_list(x)` when trying `strata_convert()` HOT 1
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