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Andrea Bagnacani's Projects

biotoolsdocs icon biotoolsdocs

Documentation for bio.tools and related community projects

destair-galaxy-atoms icon destair-galaxy-atoms

de.STAIR Galaxy atoms for assisted workflow generation of RNA-Seq and BS-Seq data analyses

destair-galaxy-tools icon destair-galaxy-tools

de.STAIR Galaxy tools for assisted workflow generation of RNA-Seq and BS-Seq data analyses

destair-talks-posters icon destair-talks-posters

This repository collects all demo materials, such as slides and posters, of de.STAIR talks, conferences, symposia, etc.

destair-training-material icon destair-training-material

Training material of every de.STAIR de.NBI training event, on-site support training, shared on-line videos and scripts

forgi icon forgi

An RNA manipulation library.

forna icon forna

Create force-directed graphs of RNA secondary structures.

forna-serve icon forna-serve

A customized ViennaRNA forna web-server to display RNA triplexes as represented in the TriplexRNA database.

galaxy icon galaxy

Data intensive science for everyone.

nupack-serve icon nupack-serve

A wrapper for the NUPACK software suite, which removes I/O bound operations and returns results in the JSON format

triplexer icon triplexer

A computational pipeline that builds the backend database of the TriplexRNA: a database of cooperative microRNAs and their mutual targets.

triplexrna icon triplexrna

A database of cooperating microRNAs and their mutual targets

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