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cvignac avatar cvignac commented on September 28, 2024 1

Hello,
all transformer layers take as input X, E and y. Even if the output dimension of y is eventually 0, y is still useful. The only thing that is not trained is mlp_out_y, that you can disable if you want.

For the regressor model in the conditional generation experiments on the contrary, the output dimensions of X and E are 0, but the output dimension of yis 1 or 2.

Clement

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haoming-codes avatar haoming-codes commented on September 28, 2024

y is indeed not used for computing the loss. The input y to the transformer is the graph-level feature of the noisy_data, computed by compute_extra_data. The output y from the transformer is not used as input to the next denoising step.

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najwalb avatar najwalb commented on September 28, 2024

@haoming-codes yes and this leads to the network layers using y to not be updated during training.

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najwalb avatar najwalb commented on September 28, 2024

The part of the network transforming y in the last transformer layer (y_y, e_y, x_y) is also not training. But I get what you mean by 'y' is still useful, since it's at least incorporating time to the other variables in the network. Thanks for clarifying!

Best,

from digress.

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