idr Goto Github PK
Name: Image Data Resource
Type: Organization
Bio: The Image Data Resource (IDR) is an online, public data repository seeks to store, integrate and serve image datasets from published scientific studies
Twitter: IDRNews
Name: Image Data Resource
Type: Organization
Bio: The Image Data Resource (IDR) is an online, public data repository seeks to store, integrate and serve image datasets from published scientific studies
Twitter: IDRNews
Setup GlusterFS and Heketi for dynamic volume provisioning
IDR submission ticketing system
Docker image for downloading IDR datasets
Bio-Formats top-level build for all components
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
Bio-Formats image file format to raw format converter
Example of using Celery as a lightweight distributed computing framework
A Conda package for idr-py
Deployment infrastructure for the Image Data Resource
Export Django monitoring metrics for Prometheus.io
https://idr-analysis.openmicroscopy.org static content
Log analysis and visualisation for the Image Data Resource (IDR)
Curated metadata for all studies published in the Image Data Resource
Jupyter Notebooks for the Image Data Resource
Library for accessing the Image Data Resource
Utility scripts for managing IDR submissions
Tools for generating and transferring Zarr datasets
Source for the IDR static website.
IDR metadata template for use in submitting your own dataset
Metadata files for the idr0002 submission
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