int-brain-lab
int-brain-lab Goto Github PK
Name: International Brain Laboratory
Type: Organization
Twitter: IntlBrainLab
Name: International Brain Laboratory
Type: Organization
Twitter: IntlBrainLab
int-brain-lab
Initial repo for behavioral analyses
Train ANN-RNNs to perform the IBL task and then dissect them.
Brain flatmaps generation
Firmware for Bpod HiFi Module
Python package for elastix-based registration of tissues to atlases; with mouse brain registration to the Allen CCFv3 built-in.
default mode network manifold analysis
Urai AE, Aguillon-Rodriguez V, Laranjeira IC, Cazettes F, The International Brain Laboratory, Mainen ZF & Churchland AK (2021) Citric Acid water as an alternative to water restriction for high-yield mouse behavior. eNeuro, 8(1). doi: 10.1523/ENEURO.0230-20.2020
clusterless decoding of neural data using a mixture of Gaussians (MoG)
DataJoint deployments for IBL's kubernetes cluster. Codebase for IBL Navigator located in: https://github.com/datajoint-company/ibl-navigator.
DataJoint Tutorial for IBL pipeline
An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)
Example notebooks for the Dandy Hub archive
Community Detection for spike data
Toolbox for change-point detection and ideal-observer analyses of IBL task data
Collection of tools to handle Neuropixel 1.0 and 2.0 data
A collection of methods and tools for experimental photometry data
DataJoint pipeline for IBL project
A light version of IBL pipeline that allows users to access datajoint tables.
Style guidelines for IBL papers
Conversion of IBL data to NWB format.
Gallery of visualizations and associated code
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