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Modeling and correcting fragment sequence bias for RNA-seq
Cleaning transcriptome annotations with ab initio assemblers
Python rewrite of bakR (for self-educational purposes)
Significantly expanding the functionality and flexibility of bakR
Functional Annotation of Custom Transcriptomes v2
Extension of rna-seq-star-deseq2 Snakemake workflow to process NR-seq data for bakR
Significantly improved bam2bakR implementation
Reproducible example for featureCounts bug posted to Bioconductor support
Flattening annotation for bakR
Snakemake implementation of Simon lab TimeLapse pipeline
R package for performing differential mutation analysis
R package to calculate junction coverage compatibility (JCC) scores
Code I write as a I learn C and low-level programming concepts
Code I write while learning Pytorch
NR-seq (TimeLapse-seq, SLAM-seq, TUC-seq, etc.) fastq simulation pipeline
One-stop-shop for documentation of my Snakemake pipelines
PRO-seq + ChIP-seq pipeline, with potential NET-seq/ATAC-seq/etc. extensions
Script for analyzing pulse chase data with bakR
Helping MB&B 121L students install Python
scRNAseq Snakemake pipeline for the sake of self-education
Streamlining SLAM-seq analysis with ultra-high sensitivity
Repository to test if configure files are necessary for installation from Github
Book to accompany "Statistical Intuition for Modern Biologists"
Materials I developed for an intro to statistical modeling/simulations workshop
Toy Snakemake workflow to test modularization syntax
Align almost any kind of RNA-seq data
Snakemake implementation of TimeLapse pipeline developed by Simon lab
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.