Comments (2)
As a result of the bindingType
and bindingRegion
being ignore, the distancetoFeature
is not limited to genes in the area
and can be as many as 3599488 bases away from the closest feature...
from chippeakanno.
Please check the seqlevels of your peaks and annoData.
from chippeakanno.
Related Issues (20)
- invalid class "CompressedGRangesList" object HOT 1
- genomicElementDistribution not found HOT 5
- toGRanges() no longer working in response to UCSC update HOT 3
- Questions on the how genomicElementDistribution works HOT 1
- error in enrichmentPlot() when providing a partially empty GO object HOT 1
- toGRanges() can't read in file name HOT 1
- Differences between bedtools overlap / findOverlaps and findOverlapsOfPeaks HOT 10
- disjointExons removed in Bioconductor 3.17 HOT 1
- How to understand otherExon HOT 7
- `findOverlapsOfPeaks(gr1, gr2)` Error in FUN(X[[i]], ...) : Inputs contains duplicated ranges. please recheck your inputs. HOT 6
- How to set the circle size same proportion of the number of peaks when there are more than 2 sets using `makeVennDiagram`? HOT 5
- oligoSummary not populating the motif matrix output field HOT 2
- makeVennDiagram fails with error 'Unexpected parameter length for "col"' HOT 4
- cvglists rtracklayer import error: Error in stop_if_wrong_length(what, ans_len) 'ranges' must have the length of the object to construct HOT 4
- hello,I don't know how to deal with it,can you help me figure it out. thanks HOT 8
- makeVennDiagram produces undesired console output HOT 6
- Regarding oligoSummary() HOT 1
- Annotation for dm6 does not contain gene_name HOT 2
- save featureAlignedHeatmap output to picture file ? HOT 2
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from chippeakanno.