cvglists rtracklayer import error: Error in stop_if_wrong_length(what, ans_len) 'ranges' must have the length of the object to construct about chippeakanno HOT 4 OPEN

Hi @c2b2pss , I seem not able to replicate this error. Which version of ChIPpeakAnno and rtracklayer are you using? I tested with ChIPpeakAnno v3.28.1 and rtracklayer 1.54.0 and it works fine.

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@hukai916

Thank you so much for the quick reply!

packageVersion("ChIPpeakAnno") 
[1] '3.32.0' 
packageVersion("rtracklayer") 
[1] '1.58.0'

Do I need to downgrade? I am using Bioconductor 3.16 and it gives me ver 3.32.
I am using R 4.2 on Linux.

Edit: I cannot find source for ver 3.28.1 of ChIPpeakAnno

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Any ideas?

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Hi @c2b2pss , I still can not replicate your error with 3.32.0. I built a Docker image to test your codes and it works well. Can you install Docker and use the following image to test so that we have exact the same environment? This image comes with the latest ChIPpeakAnno v3.32.0.

docker pull hukai916/r_4.2.2:0.2

Then,

docker run -it hukai916/r_4.2.2:0.2

Then, run your code from there and let me know if you still encounter the problem.

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