le-yuan Goto Github PK
Name: Le Yuan
Type: User
Location: Chalmers University of Technology
Name: Le Yuan
Type: User
Location: Chalmers University of Technology
Extract lineage CSVs from NCBI for use with sourmash lca.
This repository contains code and data needed to replicate the analysis carried out in the manuscript Li G, et al. 2020.
Biopython Tutorial Chinese Translation
cameo - computer aided metabolic engineering & optimization
Data and scripts for the paper "Fast automated reconstruction of genome-scale metabolic models for microbial species and communities"
COBRA Toolbox for genome-scale models of metabolism and expression (ME-models)
COBRApy is a package for constraint-based modeling of biological networks
This is a code for compound-protein interaction (CPI) prediction based on a graph neural network (GNN) for compounds and a convolutional neural network (CNN) for proteins.
《动手学深度学习》:面向中文读者、能运行、可讨论。英文版即伯克利“深度学习导论”教材。
A Deep Learning based Efficacy Prediction System for drug discovery
findPC: Automatic selection of number of principal components
HGTphyloDetect is a versatile toolbox to identify horizontal gene transfer (HGT) events combined with phylogenetic analysis.
The generic genome-scale metabolic model of Homo sapiens
《可解释的机器学习--黑盒模型可解释性理解指南》,该书为《Interpretable Machine Learning》中文版
《统计学习方法》的代码实现
Secretory Pathway Reconstruction for Human, CHO, and Mouse
Horizontal gene transfer (HGT) identification pipeline
The code of a graph neural network (GNN) for molecules, which is based on learning representations of r-radius subgraphs (i.e., fingerprints) in molecules.
Scripts to download genomes from the NCBI FTP servers
🐞 Convert NCBI taxonomy dump into lineages
A fast, parallelized, memory efficient, and cache-optimized Python implementation of node2vec
collection of bioinformatic scripts
A Python 3 implementation of Thermodynamics-based Flux Analysis
This is a repository for the course Python programming in 2021
Python wrapper for the IBM RXN for Chemistry API
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.