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lt96's Projects

branchanalysis2d-3d icon branchanalysis2d-3d

ImageJ plugin: performs morphometric analyses of structures with branching morphologies (e.g., neuronal dendritic spines, vascular morphology, and primary cilia)

copytranslator icon copytranslator

Foreign language reading and translation assistant based on copy and translate.

coupling1dbf icon coupling1dbf

Code for coupling 1-D blood flow and 3-D tissue perfusion models.

matrix_derivatives icon matrix_derivatives

This is a note on matrix derivatives and described my own experience in detail. Hope you'll like it.

mnet_deepcdr icon mnet_deepcdr

Code for TMI 2018 "Joint Optic Disc and Cup Segmentation Based on Multi-label Deep Network and Polar Transformation"

pymoresane icon pymoresane

Repository for the Python version of the MORESANE deconvolution algorithm

quartz-epic icon quartz-epic

Quantitative Analysis of Retinal Vessel Topology and Size for EPIC

qurva icon qurva

Quantitative Retinal Vascular Assessment

retina-features icon retina-features

Project for segmentation of blood vessels, microaneurysm and hardexudates in fundus images.

retinopathy icon retinopathy

Coursework dedicated to retinal image analysis and diabetic retinopathy detection.

vmtk icon vmtk

the Vascular Modeling Toolkit

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