Sam Nicholls's Projects
Driver for Adafruit's TCS34725 RGB Color Sensor Breakout
Provides a simple genome browser that pulls data from the API in Python.
tools for assessing the accuracy of genome assemblies
A fork of the official development repository for BCFtools. To compile, the bcftools+calling branch of htslib is needed: git clone --branch=bcftools+calling git://github.com/samtools/htslib.git htslib
Conda recipes for the bioconda channel.
Library for parsing several formats in bioinformatics
Experimental robotic sailing boat daemon
a command line tool for forcing files to stick together
BridgeBuilder efficiently remaps BAM/SAM reads to a new reference by first building a "bridge" reference, first mapping to that bridge, and then remapping only a subset of reads to the full new reference.
chitin: an awful shell for awful bioinformaticians
A django project to deploy so chitin has a cloud to shout in
The one true mplayer queueing node js application
SDK for GPU accelerated genome assembly and analysis
release scripts for coguk
Second Year Java Assignment
OS-agnostic, system-level binary package manager and ecosystem
Potentially useful addendums for Programming for Scientists
Statistics module for award winning depressionbot
rapidly rid reads of horrid humans
A Python library for phylogenetic scripting, simulation, data processing and manipulation.
IRC bot of the 21st century.