staph-b Goto Github PK
Name: StaPH-B
Type: Organization
Bio: State Public Health Bioinformatics Workgroup
Blog: http://www.staphb.org/
Name: StaPH-B
Type: Organization
Bio: State Public Health Bioinformatics Workgroup
Blog: http://www.staphb.org/
Resource for AMD Academy
This document serves as a guide for State Public Health Laboratories considering hiring or working with bioinformaticians. It is currently under review with APHL and CDC.
Various pipelines and scripts used by the CO state public health lab
Site for AMD Central Region
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
Site for AMD Midwest Region
BRR and WFD resource pages for the Mountain Region.
C. auris analysis workflow developed by the CDC translated for Nextflow
(In Development) - Plasmid searching and annotation tool for finished genome assemblies.
Scripts, pipelines, and training materials for the AMD Southeast Region
Visit the site here: https://staphb.org
Python Toolkit for using containerized programs in either Singularity or Docker
Public health bioinformatics repository for WDL workflows to analyze viral genomes.
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Open source projects and samples from Microsoft.
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Data-Driven Documents codes.
China tencent open source team.