Topic: admixture Goto Github
Some thing interesting about admixture
Some thing interesting about admixture
admixture,Set of scripts used for the paper "A Neurodegenerative Disease Landscape of Rare Mutations in Colombia Due to Founder Effects"
User: acostauribe
admixture,Rapid population clustering with autoencoders
Organization: ai-sandbox
admixture,Utilities for analyzing next generation sequencing data.
Organization: angsd-wrapper
admixture,Analysis of transcriptome imputation using paired genotype-expression data from SAGE and GEUVADIS
Organization: asthmacollaboratory
admixture,Miscellaneous scripts that do not really deserve their own repos
User: baslare
admixture,Random bash scripts for working on the AHPCC cluster and for processing input and output files for various programs
User: btmartin721
admixture,Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files
User: btmartin721
admixture,Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile
User: btmartin721
admixture,Tool to estimate purity of tumor samples exploiting DNA Methylation data
Organization: cgplab
admixture,A data clustering package based on admixture ratios (Q matrix) of population structure analysis.
User: darkeyes
admixture,R scripts that use Shiny to render interactive popgen plots
User: epsalazarf
admixture,tips and tricks in genome-wide association studies - a tutorial
User: esohkevin
admixture,faster haplotype-based admixture inference and dating software
Organization: hellenthal-group-ucl
admixture,haplotype-based admixture inference and dating software
Organization: hellenthal-group-ucl
admixture,Combining phylogenetic networks and Random Forests for prediction of ancestry from multilocus genotype data
User: jgeofil
admixture,Simulator of secondary CONtact using Fisher's JUNCTION representation of genome admixture.
User: kamilsjaron
admixture,This repository contains practical data analyses exercises for the special course on Paleogenomics and Anthropology held at the National School of Anthropology of Mexico (ENAH), May 6 to 10, 2019. Topics include performing QC on aDNA NGS data, assigning mtDNA haplogroups and testing hypotheses w/PCA and ADMIXTURE analyses. No previous command-line experience needed.
User: mnievesc
admixture,Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
User: nicocriscuolo
Home Page: https://nicocriscuolo.shinyapps.io/StructuRly/
admixture,Repo to analyze population genetic data with many different methods
Organization: novembrelab
admixture,Julia wrapper of the ADMIXTURE program for estimating ancestry
Organization: openmendel
admixture,Repository for code used in the study "Patterns of population structure and complex haplotype sharing at continental and local scales in field isolates of the green alga Chlamydomonas reinhardtii"
User: rorycraig337
admixture,An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
User: royfrancis
Home Page: http://royfrancis.github.io/pophelper/
admixture,Interactive interface for pophelper using shiny web framework.
User: royfrancis
Home Page: http://royfrancis.github.io/pophelperShiny/
admixture,Diablo G25 - is a tool for conversion of VCF file to 23AndMe format and calculation of admixture scores from it.
User: thesergeypixel
admixture,Tutorial for visualising admixture on a map
User: tom-jenkins
admixture,R package and web app for spatial visualisation of admixture on a projected map
User: tom-jenkins
admixture,A Snakemake powered pipeline developed to perform population structure and admixture analysis given multiple Variant Call Format datasets. This has been developed in partial fulfilment of a MSc in Bioinformatics at the University of Pretoria by Graeme Ford.
Organization: tuks-icmm
admixture,STRUCTURE and ROLLOFF reimplementations for CS 4775 (Computational Genetics and Genomics)
User: veeara282
admixture,Imputation and Admixture for lcWGS in one goal
User: zilong-li
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