wuaipinglab / scimmucc Goto Github PK
View Code? Open in Web Editor NEWHierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
Hi!
Impressive tool, many thanks for developing it!
I've been trying to implement the scImmuCC_Layered with my own data, but I keep on receiving, as output, the data from the tutorial.
Is it possible to fix this?
Many thanks,
Hi,
I get the following error to the example code, using the example data in the readme file:
Error in seurat_Heatmap(count, layer1_genelist, ssGSEA_result, "Layer1"): no slot of name "counts" for this object of class "Assay5"
Traceback:
1. scImmuCC_Layered(count = count, Non_Immune = FALSE)
2. seurat_Heatmap(count, layer1_genelist, ssGSEA_result, "Layer1")
Could you help me resolve it?
Thanks!
Best,
Eni
Impressive work! Do you have any plan to extend this package for mouse immune cells annotation?
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.