Tibanna Metrics isn't being gathered. about tibanna HOT 8 CLOSED

@klai5 You shouldn't have to add any configuration to get the metrics, but if the instance runs for less than 5 minutes, the metrics data may not be collected. Was this the case? You can also check by running tibanna plot_metrics -j <job_id> and look at the html link generated.

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Thanks for the fast response! No i was running picard's illuminabasecallstosam and it took ~25 minutes. I ran that command prior to checking the postrun json and it gave me "Metrics plot is already on S3 bucket." I checked the html/tsvs at the locations provided by the command and they were empty. The only thing logged was the start & end time. Do you know if you have to enable anything on the AWS side? Thanks again!

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@klai5 Is your region us-east-1? It looks like the metric collection may not work for the other regions.

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I see. I am using us-west-2. Is there any way to make this work on other regions, or should I exclusively use us-east-1?

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I'm fixing it now.

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@klai5 It should work with 0.17.3. It requires redeployment. Thanks for reporting it and sorry about the problem!

tibanna deploy_core -n check_task_awsem [-g group] [-s suffix]

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@klai5 You should be able to get the metrics for the current job using tibanna plot_metrics -j <job_id> without redeployment.

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Looks like it works! Thanks!

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