Couldn't get a file descriptor referring to the console about tibanna HOT 5 CLOSED

@chandanbfx Can you tell whether the error message is coming from Snakemake or from Tibanna?

from tibanna.

Hi @SooLee
I am not sure about the error from where it is throwing exactly. However, I successfully executed the workflow on a local machine, and when I tried to run a workflow using tibanna on AWS, then this error occurred.

from tibanna.

Hi @SooLee

The issue occurred due to AWS's limited permission for the IAM user and get resolved when provided full access.

Now I am getting this error
errorMessage": "Not enough space for input files: download failed. And eventually, the execution failed.
logfile:
XTMjMnV5b2NW.log

Any suggestion on how to configure EBS volume.

thanks
Chandan

from tibanna.

Great that the permission issue has been resolved. In general, you can add a user to the tibanna group by tibanna add_user -u <user> -g <group> which should give the appropriate permission to the user to run a workflow.

As to the disk space (EBS volume), have you tried the following?

resources:
        disk_mb=20000

from tibanna.

Thank @SooLee It's fixed the "no space" issue.

from tibanna.