Jean Fan's Projects
Interactive data visualizations with Quarto and Observable JS for Article Processing Charge data from Butler et al (QSS 2023)
Generating art with code
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
Bayesian approach for detecting copy number alterations from single cell RNA-seq data
Your inspiration for click-bait-y bioinformatics blog titles
canvasXpressR: an R package to help you share results with collaborators using canvasXpress
Quarto + Observable JS to explore Cost of Medical Procedures
A R package for Grade of Membership model and Visualization of counts data:
Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method
ELIZA therapy chat-bot with sentiment detection and response via avatars
An R package to construct Elastic Principal Graphs
Gene Sets as R Environments
Course website for Genomic Data Visualization 2023
Scalable integration of single cell RNAseq data for batch correction and meta analysis
a participatory web-based art installation
InCHlib (Interactive Cluster Heatmap library)
https://jean.fan
Lightweight Iterative Gene set Enrichment in R
Random Composition in Red, Blue, and Yellow in the style of Piet Mondrian
Multi-sample Unified Discriminant ANalysis
An interactive web application to explore the reasons for medical visits based on the 2003-2010 National Ambulatory Medical Care Survey data
Open grants list
A digital light tracer light box made using Paper.js
Inferring large copy number variations from single cell RNA-seq data
Random picture quotes using various APIs
WebGL point cloud viewer for large datasets
Publicly available dataset for bioinformatics and integrative -omics research