Comments (4)
@adam2392
Adam, I suggest using both the equal_var=True
and equal_var=False
flags for the unpaired Lq-likelihood-ratio-type test (LqRT), similarly to how it's done for the t-test here . syntax should be almost identical to the one of the scipy's t-test.
also, just as a clarification LqRT does not assume a gross-error model, it assumes normal distribution, but degrades less if there is contamination in the sample.
lastly, there is a preprint that discusses this package specifically, as opposed to the general LqRT; it can be found here.
from dabest-python.
Hi @adam2392 ,
I'm happy to receive a PR that implements this additional test in the results dataframe. You will need to do a decent job of explaining the test in the documentation as it is obscure.
Do you have any examples of this test being used in biomedical research papers?
Joses
from dabest-python.
Hi @josesho so in terms of the documentation, would this just be adding documentation into:
- tutorial.rst
- a release note
?
Or are there additional files to change regarding this.
Do you have any examples of this test being used in biomedical research papers?
No because it is a new publication, but the test is proven to be more robust (compared to the t-test) in terms of power for even small changes away from a perfectly Gaussian model, and it is better then the Wilcoxon rank-sum test in this aspect. So in terms of biomedical data, this would be nice because typically no data is perfectly modeled as a single Gaussian. I am using it though for my own research now as a result. The paper and pip package came out of my university, so I found out about it as soon as it was published.
from dabest-python.
Closed with #89
from dabest-python.
Related Issues (20)
- color_col formatting HOT 2
- pandas version conflicts HOT 2
- Plot ONLY mean diff HOT 1
- Error with dataframes containing non-string column names HOT 3
- Is it possible to get access to the underlying bootstrap samples generated to obtain the 95% CI for ES? HOT 1
- cannot plot the figures HOT 3
- Estimation plot only HOT 1
- Warning: Not all points displayed... HOT 2
- Are multi-group p-values corrected for multiple comparisons? HOT 2
- contrast_ylim does not work for matplotlib HOT 1
- DABEST calculation of median difference CIs often fails HOT 5
- Error in bca.ci(boot.out, conf, index[1L], L = L, t = t.o, t0 = t0.o, : estimated adjustment 'a' is NA HOT 1
- New Release: v2023.02.14
- Error in changing the the linewidth of the lines used to join each pair of observations HOT 1
- Possibility to do mixed model statistics ? HOT 2
- Little problems with the plots HOT 3
- Limitation of paired analysis: Statistics comparing to only one group instead of with each other
- delta_g does not plot together with hedges_g
- Options for plot appearance HOT 2
- cannot plot figure - 'numpy.ndarray' object has no attribute 'categories' HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from dabest-python.