Hui-Chong's Projects
GitHub profile
Hui Chong's Homepage
Website for global antimicrobial peptides.
COVID-19 Mortality Rate Prediction
My curriculum vitae.
Resources for cross-DB conversion of functional terms: KO number, GO (Gene Ontology) term, EC (Enzyme Commission) number, and MetaCyc reaction/pathways ID.
Algorithmic implementations for Honor Track of Genome Sequencing (https://www.coursera.org/learn/genome-sequencing/home/welcome)
A Computing Data Science Perspective on Gene Splice Site Identification.
Microbial source track using Jensen-Shannon Divergence.
Learning parallelization using Jug.
Linux manual for bioinformaticians, still updating.
Taxonomical abundance remapping and feature engineering for taxonomic profiles.
Implementation of three algorithms to solve the motif finding problem.
Synthetic mixture-based data augmentation for microbial source tracking
Papers I read.
A template repository for PYPI package, just for personal use.
A simple hands-on application using Quasar UI framework.
A remarkjs-based slides template: simple and elegant.
A template repository for reproducible research using Jupyter notebook (recommended).
Top-down programming for problem solving.
Unifrac-based PCoA visualization of microbial community samples.
This is an archived repository. The development has been transferred to https://github.com/BigDataBiology/AMPSphereWebsite.