adrienlemeur Goto Github PK
Name: Adrien Le Meur
Type: User
Twitter: adrien_meur
Location: France
Adrien Le Meur's Projects
adrien.le-meur
Online CV
adrien.le-meur.github.io
ani-m
Average Nucleotide Identity analysis with MUMmer under the hood
atelierngs
Scripts pour l'atelier NGS
bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
best-readme-template
An awesome README template to jumpstart your projects!
bibliography
My bibliography Adrien Le Meur
bioinfo
Various bioinformatics tools
comparative_genomics_ami2b
comparativegenomicproject
Projet Génomique Comparative - Adrien & Audrey & Leila
dockerfiles
fastq-dl
Download FASTQ files from SRA or ENA repositories.
fastq-shuffle
A shuffle program for FASTQ files
full_table_samples
Liste complète des fichiers utilisés dans le cadre du stage "Identification d'ADN de pathogène dans des échantillons anciens"
genotube
genotube
github-markdown-toc
Easy TOC creation for GitHub README.md
kraken2
The second version of the Kraken taxonomic sequence classification system
maketube
maketube is an artificial genome generator for Mycobacterium tuberculosis
mektub
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
mtbseq_source
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
mykrobe
Antibiotic resistance prediction in minutes
nicolas_strain
partitionfinder
python script to generate a multisequence matrix from VCF
perl
Perl Script to convert fasta to phylip
phylotax_builder
projetweb
public_pres
samclip
Filter SAM file for soft and hard clipped alignments
sentieon-scripts
Helper scripts for biological data processing from Sentieon
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