Comments (1)
Related Issues (20)
- Not able run load databases getting error
- hg19-500bp-upstream-7species.mc9nr.feather file is missing in cisTarget database
- AUC scores calulation
- How to apply SCENIC to zebrafish except for human,mouse and fly at the initializeScenic step? HOT 1
- could not find function "calcRSS" HOT 7
- Please reopen "Problem with initializeScenic() #168" HOT 2
- reduce number of top regulons per cell type
- Error in asMethod(object) : Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102 Calls: as.matrix -> as.matrix.Matrix -> as -> asMethod
- Error in match.arg(method) : 'arg' must be of length 1 when running runSCENIC_2_createRegulons
- Error in setting scenicOptions, what should I do?
- runSCENIC_3_scoreCells errors: Not enough regulons with at least 10 genes.
- ✖ Column `features` doesn't exist. HOT 2
- Installation error
- RcisTarget question HOT 1
- The clustering was not obvious.
- Error in runSCENIC_3_scoreCells HOT 3
- Installation issue because of 'arrow' package
- Error in matrix(data = 0L, nrow = mat@Dim[1], ncol = mat@Dim[2])
- p-value of regulon activity calculation
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