Comments (31)
Oh! There is no bug today! Thanks!!
But there is still a problem with "extensions", as you see below...
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Sorry, the instructions are lagging behind the changing situation ... Can you try with the stable version?
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I've just tested latest stable on mac, and it is broken. Let me look into this.
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The stable version does not allow me extracting my "Segmentations", painted in the tumors.
from slicerradiomics.
Thanks for your feedback. I would be happy if you would find the mistake!
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I don't know why this is happening, but some dependency packages are not available. Can you try opening python console
and then running the following commands in the console:
slicer.util.pip_install('pywavelets')
slicer.util.pip_install('python-dateutil')
and then try to use the module again after restarting Slicer (stable version)?
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When I opened python console, this appears and I cannot follow your instructions...
from slicerradiomics.
yes - can paste these two lines, one at a time, into that window, and hit "Enter"?
slicer.util.pip_install('pywavelets')
slicer.util.pip_install('python-dateutil')
from slicerradiomics.
Okay, so I did.
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Can you now restart Slicer, and see if the module works for you, or let me know what does not work?
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I restarted and this happened... I´m so sorry for the circumstances...
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what messages do you see after you enter slicer.util.pip_install('pywavelets')
and hit "Enter" in the python console?
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@iboeth something went wrong in your upload in the previous post.
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Next try.
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I recently starteted 3D-Slicer again and this appeared. Perhaps it helps...
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Can I use an old version to avoid this bug?
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In my opinion, the "oldest" version is 4.11.
I restarted this version of 3D-Slicer the last days, but it did not work...
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Try to use python?
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can it work now?
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No, it ist still the same.
I searched for "Radiomics" and the following happened:
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Now, can it work?And Is there a solution for the problem?
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This is the current status. The extention "Radiomics" is also still mapped differently than on the Windows system, but I do not know if that matters...
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@LiDelight can you open the python interactor, and run the following two commands there? The issue is in the missing dependency packages, and when I did what I am suggesting here on mac, this resolved the problem for me.
slicer.util.pip_install('pywavelets')
slicer.util.pip_install('python-dateutil')
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@fedorov: The Link is usefull for me, too! It seems that my problems are solved!! Thank you so much!!
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OMG, it work, now. I install the stable version of 3D slicer. 淦!
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It is me again...
Using the ruler shows no measure of my ROI. What am I doing wrong?
from slicerradiomics.
Please use Slicer forum for questions about Slicer https://discourse.slicer.org.
from slicerradiomics.
Thank you!!
from slicerradiomics.
Yesterday I added a fix to check for missing modules and install if they are not present. Please check the latest stable build and let us know if the issue is not resolved.
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Related Issues (20)
- Batch Processing HOT 5
- voxel based feature extraction HOT 1
- SlicerRadiomics extension not available for Slicer 4.11.0 on Mac OS HOT 9
- Feature calculation failed on windows HOT 2
- Resampling and LoG filtering fail when done at the same time. HOT 2
- How to create Mask file of segmentation? HOT 2
- Install SlicerRadiomics From 3D Slicer on MAC 10.15.5 HOT 3
- No module named radiomics
- Unable to install SlicerRadiomics on Windows from ExtensionsManager
- Cannot use the module with input mask defined by a segmentation node
- Fix extension build HOT 2
- Grant maintainer access to slicer core developers HOT 4
- Add support for additional image transformations in pyradiomics
- Add support for BATCH mode
- SlicerRadiomics unavailable for macOS since Slicer Preview 5.3.0 as of 2023-03-31 HOT 19
- SlicerRadiomics extension cannot be found on mac HOT 2
- Add UI control for normalization option
- Error extracting features HOT 14
- Can't find Slicer Radiomics in Mac HOT 1
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