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Name: Akanksha Verma
Type: User
Bio: Tri-I Computational Biology and Medicine
Twitter: AkankshaVe
Location: New York, NY
Name: Akanksha Verma
Type: User
Bio: Tri-I Computational Biology and Medicine
Twitter: AkankshaVe
Location: New York, NY
A curated list of nextflow based pipelines
Genomics Workflows on AWS
Chromosome arm aneuploidies in cancer
A continually expanding collection of cancer genomics notes and data
Python package to generate Gaussian (1/f)**beta noise (e.g. pink noise)
Analyzing RNA-Sequencing Datasets for COVID19 Collaboration
Analyze CRISPR and shRNA functional genetic screening data
A centralized location for storing curated data ready for inclusion in cBioPortal.
Deep learning predicts chromosomal instability from histopathology images
An R interface to enrichR
Assessing and prioritizing epigenetic factors in TNBC Patients
A collection of scripts and notes related to genomics and bioinformatics
Mutect pipeline with Nextflow
Code for a shinyapp that calculates nutrition values for food and recipes
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
IRE1-XBP1s
An example RNA-seq pipeline with Nextflow and using public ENCODE data
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Code and other documentation for apps in the Shiny Gallery ✨
Bayesian Factorization with Side Information in C++ with Python wrapper
Example Streamlit app that you can fork to test out share.streamlit.io
Few shot learning for cancer
Repository to generate docker image for telomerehunter
Test data to be used for automated testing with the nf-core pipelines
Associating transcriptional signature with survival data
Generic U-Net Tensorflow 2 implementation for semantic segmentation
this is a simple demo for image segmentation.----unet网络进行语义分割的demo,用的数据集是KITTI
Drug enzyme mapping visualizing using hadoop workflow
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.