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Alana S. Weinstein's Projects

bme211_dream3 icon bme211_dream3

Implementation of the Yip et al. 2010 (PLoS ONE) algorithm/method that won the DREAM3 2008 In Silico Network Reconstruction competition for UCSC's BME 211 course, Fall 2016.

disruption icon disruption

Use flow disruption to find most influential genes in a network.

lab3rotationproject icon lab3rotationproject

Use gene dependency data to find similar gene vulnerabilities. Predict gene dependency from gene expression data

tools icon tools

My own personal scripts for basic tasks.

ucsc_viper icon ucsc_viper

The UCSC version of the VIPER package for bioinformatics and systems biology

ucscthesis icon ucscthesis

LaTeX templates for UCSC thesis and/or advancement (thesis proposal)

viper icon viper

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/viper.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=viper.

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