Comments (1)
Seems to work fine in the Github version with:
example(plotHighestExprs)
example_sce <- normalize(example_sce)
plotHighestExprs(example_sce,exprs_values = 'logcounts')
from scater.
Related Issues (20)
- aes_string deprecation leads to incredibly hacky code HOT 4
- plotPCA not coloring points HOT 2
- Include colData in plotReducedDim ggplot object p$data? HOT 5
- Adding alias to exprs_values argument HOT 3
- Argument naming: "assay_name" (scater) vs. "assay.type" (scuttle) HOT 2
- Use scattermore to speed up plotColData and plotReducedDim for large datasets HOT 4
- Gene names in nmf basis HOT 2
- PlotGroupedHeatmap - column clustering HOT 2
- partial match argument warning/error HOT 4
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- add a half violin function HOT 3
- Strange warning HOT 2
- Column names not showing up in plotGroupedHeatmap() HOT 3
- Matrix 1.6.2 update as_cholmod_sparse issue with runPCA HOT 3
- runPCA Variance Explained not Recorded HOT 1
- group_by for Faceting HOT 1
- Specifying a Custom Dimension Reduction Name Causes Plotting Error
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- Problem with deprecated argument in runPCA HOT 3
- Box plot instead of violin plot HOT 3
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from scater.