Comments (3)
Alanocallaghan
commented on August 11, 2024
1
Okie doke. I'm going to transfer this text/code to that issue to avoid duplication
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Alanocallaghan
commented on August 11, 2024
Interesting. When testing, I observed that the labels looked fine on the example plot you provided
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ycl6
commented on August 11, 2024
Oh! That's interesting indeed.
Below is the code I use to plot. It produces the same plot as before with the text repelled away from centre.
Looking at the suggestion in slowkow/ggrepel#180 (comment), I also tried point.size = NA but that didn't work either.
set.seed(0123210)
plotReducedDim(sce.paul, "TSNE", colour_by = "label", text_by = "label", text_size = 7, theme_size = 16)scater_1.23.4
ggrepel_0.9.1
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