Comments (1)
Hi Colin,
thanks for reporting this bug. I was adding "/" to the prefix, that's why it required M-P directory to be present, while you were asking for a simple prefix to the output file names. This is fixed now, please check the GitHub master.
Note that STAR requires the full path to the --outFileNamePrefix to exist before the run, even for the 1-pass run.
Cheers
Alex
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