Related Issues (20)
- Only a few genes are indexed in Genome indexing steps
- --soloCBtype String in STAR 2.7.11b for 32 bp Cell Barcodes
- Problem with STAR version using zUMIs HOT 1
- FATAL GENOME INDEX FILE ERROR: transcriptInfo.tab is corrupt, or is incompatible with the current STAR version HOT 1
- --alignIntronMax parameter usage
- clipAdapterType CellRanger4 can fail to trim longer reads with shorter insert size - 10x 3' data
- Abberant splicing between genes
- multimapper doesnt output a matrix HOT 1
- error codes HOT 1
- EXITING because of FATAL ERROR in reads input: short read sequence line: 0 and Read Name is the read sequence HOT 1
- How does STAR handle V(D)J sequences (TCR/BCR)? HOT 4
- GeneFull priority vs Ex50pAS
- Pseudo gnes having higher mapping scores than the actual gene
- Running STARsolo for pico kit reads
- STARsolo output-Summary.csv
- Segmentation fault (core dumped)
- STAR alignments generate different counts: Full genome vs Split genome
- fatal error, cannot create output file for unmapped.out.mate1.thread0
- Possible to implement special treatment of multi-gene reads for BCR/TCR genes?
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