Alfredo Morales Pinzón's Projects
Affine mid-space registration
Bash script to compute DTI-ALPS
Advanced Normalization Tools (ANTs)
JSON schema and tools for boutiques application descriptors http://boutiques.github.io
Web-based visualization tools for neurological data.
JavaScript library to display interactive medical images including but not limited to DICOM
Grassroots DICOM read-only mirror. Please report bug at http://st.net/p/gdcm
Archive your iMessage history to HTML, CSV or SQL
INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.
create a short report about a project's dependencies (license, url etc)
LORIS is a web-accessible database solution for longitudinal multi-site studies.
The set of scripts that preprocess and insert MRI data into the database.
Manager for CouchdDB servers and databases
Singularity containerized version of the NODDI toolbox.
a platform independent open source tool for open OCT images and create different labels on it
A Python-based framework for processing anatomical (T1, T2) and diffusion weighted images
Website for NA-MIC Project Weeks
Pydra Dataflow Engine
Reach Biomedical Information Extraction
Quick code to validate schemas using references to other schemas.
export and visualize your private slack channels and direct messages
Multi-platform, free open source software for visualization and image computing.
Public JSON schemas for SPINE
Utilities developed in c++ for the SPINE initiative
Docker container for THOMAS, a multi-atlas method for thalamic nuclei segmentation. THOMAS itself can be found at https://github.com/thalamicseg/thomas_new