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Hi there 👋

I'm a scientist and engineer working in the field of genomics.

I'm very fortunate to work with a wonderful community of scientists from around the world to study the mosquitoes that transmit malaria. Together we are building shared genomic datasets and using them to monitor mosquito populations and learn about how they are evolving in response to malaria control interventions.

I also love code and the transformative power of open source software to empower scientists and build bridges between people and data. I've contributed to various open source software projects and am a big fan of the Python scientific computing ecosystem and community.

If you're into using big data, code and computing technology to level the playing field for folks tackling the hard problems in improving human health, please reach out, I'd love to meet you!

Alistair Miles's Projects

agam-vgsc-report icon agam-vgsc-report

Report on genetic variation within the voltage-gated sodium channel gene in Anopheles gambiae

agamprimer icon agamprimer

Primer Design in Anopheles gambiae considering genetic variation

bcolz icon bcolz

A columnar data container that can be compressed.

biipy icon biipy

Docker image for bioinformatics analysis.

dask icon dask

Parallel computing with task scheduling

datalab-guide icon datalab-guide

User guide and documentation for the MalariaGEN DataLab service

datalab-image icon datalab-image

Defines the default user image and environment for MalariaGEN DataLab.

dphil icon dphil

Genomic epidemiology of malaria vectors in the Anopheles gambiae species complex - Alistair Miles' PhD thesis

ete icon ete

ETE is a Python programming toolkit for building, comparing, annotating, manipulating and visualising trees. It provides both a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

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