Allen Institute for Neural Dynamics's Projects
User Interface for exaSpim-UI
Base CodeOcean capsule template with a working install of `MouseLand/facemap`.
Numcodecs implementation of the FLAC audio codec
Foraging behavior browser (streamlit)
Foraging behavior browser (streamlit)
Post-acquisition video analysis
standalone streamlit app for navigating my foraging-ephys dataset
Generating rig metadata using a common framework
A Harp core implementation on the RP2040
an octal, TTL input/output device with programmable square wave output.
harp-compliant humidity, pressure, and temperature sensor
an ephys-compliant capacitive lick detector
an RP2040-based Harp hardware/firmware project template
Signal conditioning board for an implanted thermistor
a Harp-compatible device for controlling an instrumented mouse treadmill
A 16-output Harp clock synchronizer
Bonsai-enabled PWM output via Rasberry Pi Pico
device that accepts Harp timestamps and emits a coded timestamp for ephys data alignment.
a tiff-to-octree converter for dask
Tool for aligning electrophysiological features to anatomical landmarks
Summarize Bergamo Peaks
Widget that will create inputs for properties in a class