Alexandr Kalinin's Projects
Source code and workflow protocols for SOCR 3D Cell Morphometry Project
A learning resource repository for 3D machine learning
Volumetric CNN for feature extraction and object classification on 3D data.
Fast image augmentation library and an easy-to-use wrapper around other libraries. Documentation: https://albumentations.ai/docs/ Paper about the library: https://www.mdpi.com/2078-2489/11/2/125
Wining solution and its further development for MICCAI 2017 Endoscopic Vision Challenge Angiodysplasia Detection and Localization
This repository contains the source codes for the paper "AtlasNet: A Papier-Mâché Approach to Learning Mesh Synthesis". The network is able to synthesize a mesh (point cloud + connectivity) from a low-resolution point cloud, or from an image.
A curated list of awesome deep learning applications in the field of computational biology
A curated list of awesome deep learning applications in the field of neurological image analysis
BBDM: Image-to-image Translation with Brownian Bridge Diffusion Models
Add bisenetv2. My implementation of BiSeNet
D3.js-based box-and-whisker diagram
An open-source application for biological image analysis
Set of models for classifcation of 3D volumes
A complete computer science study plan to become a software engineer.
ALCF Concept to Clinic Challenge
Find pairs and compute metrics between them.
CytoData Society website
Common Evaluation Metrics for DataFrames
A curated list of data science blogs
Images and other data from the JUMP Cell Painting Consortium
Dynamic Capacity Networks using Tensorflow
A collaboratively written review paper on deep learning, genomics, and precision medicine
Ten Quick Tips for Deep Learning in Biology
3D cell image classification
The Probability Distributome Game Webapp enables this exploration of natural phenomena and models as a game of matching pairs of processes and distributions.