Comments (4)
Can you confirm that you are using the latest version of of PeleLMeX and the default version of AMReX that it ships with via Submodules/PelePhysics/Submodules/amrex
? At the top of the output from you run, you should see output with the Git hashes that exactly matches:
================= Build infos =================
PeleLMeX git hash: v23.11-54-gf91b9b8
AMReX git hash: 24.05-1-g1735fd5c6
PelePhysics git hash: v23.03-107-g1bea1bfe
AMReX-Hydro git hash: 24.04
===============================================
I am able to run the input.2d-Re500
case with these versions. If all your versions match, I'm not sure what would be causing this failure, but let us know what system you are running on and what compiler you are using if you are failing with these versions.
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I cloned the github repo 2 days ago, and there have not been any commits since then, so I am assuming that all the versions are latest.
However, when I run the code, I am getting these Git hashes, which are similar but not exactly the same:
================= Build infos =================
PeleLMeX git hash: v23.11-54-gf91b9b8-dirty
AMReX git hash: 1735fd5
PelePhysics git hash: 1bea1bf
AMReX-Hydro git hash: 24.04
Any suggestions on what should I do next?
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Yeah, the git hashes match so it looks like all your versions are correct/up to date. Run git status / git diff to double check that no files have been inadvertantly changed other than turning off MPI in the GNUmakefile, but you should be good with those versions.
Please mention what compiler (and its version) you are using and what system you are running on. If you have access to a different system, try doing a fresh download and building and running on that system.
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It's working now. In the tutorial, it was given that
#----------------------DOMAIN DEFINITION------------------------
geometry.is_periodic = 0 0 # Periodicity in each direction: 0 => no, 1 => yes
geometry.coord_sys = 0 # 0 => cart, 1 => RZ
But actually, it should be
#----------------------DOMAIN DEFINITION------------------------
geometry.is_periodic = 0 1 # Periodicity in each direction: 0 => no, 1 => yes
geometry.coord_sys = 0 # 0 => cart, 1 => RZ
I was changing the geometry.is_periodic to 0 0, and that was causing the issue. I think there is a typo in the tutorial, but anyway, thanks a lot for your help.
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Related Issues (20)
- Compilation in a cluster using a new mechanism model HOT 6
- Rough walls HOT 5
- Default value of active_control.velMax HOT 1
- peleLM.isothermal_EB = 1 causes CUDA error 700 - illegal memory access was encountered !!! HOT 2
- Auto-ignition in CounterFlow case with lu_88sk HOT 3
- Reading plt files using self-made python script? HOT 3
- Add test coverage for Efield cases HOT 1
- Repository size is too large HOT 5
- Add the diffusion coefficients of each species in the PLT directories. HOT 2
- PremBunsen3D crashes
- Compiling SUNDIALS Library on New Cluster without GitHub Access HOT 9
- Non-unity Lewis number HOT 21
- pelelm.incompressible flag segfaults HOT 1
- Hanging during initialisation with EB HOT 2
- Unnecessary code after mac FillPatchTwoLevels? HOT 16
- Wall boundary conditions (e.g. NoSlipWallIsothermal) do lead to wrong behaviour using the soret effect. HOT 23
- Adaptive mesh refinement in specific region of computational domain HOT 9
- AMReX MLMG bottom solve change causes PeleLMeX EB_PipeFlow test to fail HOT 4
- Potential incomplete updated GNUMakefile
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