Name: Angli Xue
Type: User
Company: Garvan Institute of Medical Research
Bio: Hi! I am a postdoc scientist at the Garvan-Weizmann Centre for Cellular Genomics, Garvan Institute of Medical Research.
Twitter: anglixue
Location: Sydney
Blog: https://anglixue.github.io/
Angli Xue's Projects
Personal page for Dr. Angli Xue
The code repository for the analysis in ASI/OSC Hackathon
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
This is a part of course project
Repo for The Data Scientist's Toolbox, JH course #1
The Leek group guide to data sharing
A clean R Markdown template for your reports
Explore the minimum number of variables for robust estimation of dispersion parameter in negative binomial distribution.
A 'ggplot2' implement of Venn Diagram.
glmmTMB
Pariwise analysis of GWAS
LD Score Regression (LDSC)
This is the analysis code repository for Mendelian Randomisation (MR) study between substance use behaviors (SUB) and common diseases
Contains code pipeline to generate PEER factors from pseudo-bulk data and perform eQTL association analysis
Repository for Programming Assignment 2 for R Programming on Coursera
qsub command for serveral cluster engine
R package to estimate q-values and false discovery rate quantities.
Workshop materials for DIY R package for RLadies Sydney 2021
This is the script for Getting and Cleaning Data Course Project
R toolkit for single cell genomics
Ultrafast GPU-based QTL mapper