aniv0s Goto Github PK

aniv0s.github.io

braincatalogueworkflow

Many scripts to process BrainCatalogue's data

brainhacksynergy.github.io

Website for Brainhack Synery 2019 in Utrecht

comparative-data

A repository of comparative data

dcmstack

DICOM to Nifti conversion with meta data preservation

diffusion_maps

Diffusion maps stuff

distconnect

editmesh

My beloved mesh editor

faketensorimaging

fieldtrip

The MATLAB software toolbox for MEG and EEG analysis

geodist_sulc

matlab code used for the thesis "Investigating cortical morphology through the dual origin concept"

mapalign

Diffusion map based embedding and alignment

meshgeometry

mesh geometry tools

meshsurgery

An interactive application to edit 3D meshes

mindcontrol

MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:

my-random-notebooks

Random iPython notebooks

nbpapaya

View brain images in the ipython notebook using papaya.js

neuroanatomy.github.com

nipype

Workflows and interfaces for neuroimaging packages

nki_nilearn

preprocessing of nki resting state data for nilearn

phytools

pipelines

Neuroimgaing data processing pipelines used in the lab

pydataparis2016

PyData Tutorial Paris 2016

qcsurf

Collaborative online quality control of surface data

scripts4dwi_dipy_brainhack

Scripts in python (dipy) to process and analyze DWI data

stereotaxicramon

Stereotaxic editor

surfaceratio

surface ratio estimation of local brain folding

topographica

A general-purpose neural simulator focusing on topographic maps.

v1maps_visu

volume

tool to work with volume data