ann-holmes Goto Github PK

ann-holmes.github.io

个人博客和主页

cellassign_bugs

cello

CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

decoupler_disscussion

fabric

fabric is an open-source framework for augmenting humans using AI.

generate_umi_fastq

Simulate single- or paired-end FASTQ files

generative-ai-for-beginners

18 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/

hpasubcellularvis

Adopt into the subcellular localization of HPA(Human Protein Atlas) to visualize protein subcellular localization in the cell view.

islr-python

An Introduction to Statistical Learning (James, Witten, Hastie, Tibshirani, 2013): Python code

learnperl

Learning Perl language

mytools

Some useful tools writen by myself

openai-text-embedding

Create a OpenAI compatible text-embddding server from open source text embedding model.

pheatmap

pheatmap for Python

pisces

R package for Protein activity analysis of single-cell RNAseq.

scanpy

Single-cell analysis in Python. Scales to >1M cells.

scrnaseq_benchmark

Bench-marking classification tools for scRNA-seq data

seaborn

Statistical data visualization in Python

singler

SingleR: Single-cell RNA-seq cell types Recognition (legacy version)

viper

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/viper.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=viper.