anyihu Goto Github PK
Name: Anyi Hu
Type: User
Company: Institute of Urban Environment, CAS
Bio: Microbial Ecology, Environmental Microbiology
Location: Xiamen, China
Name: Anyi Hu
Type: User
Company: Institute of Urban Environment, CAS
Bio: Microbial Ecology, Environmental Microbiology
Location: Xiamen, China
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
This pipeline performs a mobilome analyses on previously selected contigs
Fast and robust identificaiton of antibiotic resistance genes (ARGs) from microbial genomes and metagenome assemblies using ARGfams, a high-quality and manually cruated subdatabase of profile hidden Markov models for ARGs
Curation of Antibiotic Resistance Genes by using crowdsourcing
ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database
A hybrid assembly and MAG recovery pipeline (and more!)
bioBakery tools for meta'omic profiling
All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")
Collection of Snakemake pipeline for commin bioinformatics tasks
A Swiss-Army-Knife for Bioinformaticians
some useful scripts for working with genomics and sequencing data
Bioinformatics Tools
Scripts for analyses of particle-associated and free-living metagenomic and metatranscriptomic datasets from the permanently anoxic water column of the Cariaco Basin, Venezuela as part of the CARIACO Ocean Time Series project.
CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
R Codes for the analysis of 16S rDNA amplicon sequence data from the coastal sands
An tutorial for arg_ranker and tell the users how to gain the desired result step by step.
Read coverage calculator for metagenomics
Simple Cowtransfer Uploader/Downloader in Golang
Accurate sample inference from amplicon data with single nucleotide resolution
Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
Tools to process and analyze deep sequencing data.
DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
Easy Metagenome Pipeline 2019 (1.0)
R package for downstream Microbiome analysis
EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.