aomlomics Goto Github PK
Name: AOML 'Omics
Type: Organization
Bio: Official GitHub organization of the AOML 'Omics program. AOML is a federal research laboratory of the National Oceanic and Atmospheric Administration (NOAA).
Location: Miami, FL
AOML 'Omics's Projects
amethyst
Metagenomics analysis workflow
aomlomics.github.io
Official GitHub organization of the AOML Omics program. AOML is a federal research laboratory of the National Oceanic and Atmospheric Administration (NOAA).
cloud-classroom
Guides for using commercial cloud resources
datasets
List of datasets generated by the AOML 'Omics program
edna2obis
Code to convert eDNA metabarcoding data to Darwin Core for OBIS
erie
Study of cyanobacterial harmful algal blooms in Lake Erie using autonomous sampling and DNA sequencing
gomecc
labelmaker
Printable QR labels for samples
mitohelper
Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies
omics-data-management
Previous guide to omics data management, including NOAA Omics Data Management Plan.
opal
protocols
Protocols used by AOML Omics labs, following the BeBOP-OBON standard
roboboogie
Protocols and labware specifications for the KingFisher Flex and Opentrons OT-2 robots
sase
sedtrap
Files associated with the USGS GoM Sediment Trap (GMT cruises)
sterivex
Methods development for high-throughput eDNA sampling and extraction with Sterivex filters
study-template
Create a new repository for each study using this template.
tourmaline
Amplicon sequence processing workflow using QIIME 2 and Snakemake
tutorials
Tutorials for data science and bioinformatics
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