Comments (1)
Okay, the following modification worked for me...
original code:
# Section Save jpg with outlines
path_to_multiple_outline = os.path.join(str(gvars['path_multiple_image_directory']),original_name + "_Erosion_" +str(self.pix_erosion_mult)+ "px_" + "Outlines.jpg")
outlines_image = original_image.flatten()
IJ.saveAs(outlines_image, "JPG", path_to_multiple_outline)
modified code:
# Section Save jpg with outlines
path_to_multiple_outline = os.path.join(str(gvars['path_multiple_image_directory']),original_name + "_Erosion_" +str(self.pix_erosion_mult)+ "px_" + "Outlines.jpg")
IJ.run(original_image, "Select All", "");
IJ.setBackgroundColor(0, 0, 0);
IJ.run(original_image, "Clear", "slice");
outlines_image = original_image.flatten()
IJ.saveAs(outlines_image, "JPG", path_to_multiple_outline)
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