Related Issues (20)
- Adding an option to output loadings plot in plot_pca()
- Adjusted P-values lower than raw P values HOT 6
- test_gsea(): EnrichR website not responding HOT 2
- TMT analysis question used the DEP
- Difference between get_results ratio and get_df_wide diff columns
- Interaction term
- Error in using interactive analysis using the DEP Shiny apps HOT 4
- Handling Technical and Biological Replicates HOT 2
- Cannot install on mac HOT 2
- plot_heatmap: extract specific cluster group from heatmap HOT 1
- Error on make_se HOT 1
- Different p-value in each independent run? HOT 4
- How to extract proteins from PCs in plot_pca in DEP package
- Spearman correlation with plot_cor?
- Cannot download DEP package
- Error in .ebayes(fit = fit, proportion = proportion, stdev.coef.lim = stdev.coef.lim, : No finite residual standard deviations
- How to plot heat map for average values per sample?
- P adiusted bigger than p value? HOT 1
- plot_heatmap function not working as data_results gives 0 significant proteins
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