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Type: Organization
Type: Organization
A beautiful, simple, clean, and responsive Jekyll theme for academics
Aryee Lab Webpage
Started 07June2017
Suite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis for various protocols including Whole Genom Bisulfite Sequencing (WGBS), Reduced Representation Bisulfite Sequencing (RRBS) and Hybrid Selection Bisulfite Sequencing (HSBS).
Porting the 4d nucleosome Cut-and-Run pipeline to WDL
Code repository to reproduce all results for Sept, et al. 2023
Commands, scripts, and data for reanalysis of "Unexpected mutations after CRISPR–Cas9 editing in vivo"
Generate stats for Cromwell task calls including resource utilization & estimated costs
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/diffloop.html Contributions: https://github.com/aryeelab/diffloop. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=diffloop or https://github.com/aryeelab/diffloop/issues.
Sample Analysis for diffloop paper
An example dataset for the diffloop package
Shiny app that integrates ChIA-PET and other epigenetic tracks
Simple file showing the tracks in DNAlandscapeR
A preprocessing and QC pipeline for ChIA-PET data
ENCODE ChIP-seq pipeline
HiC uniform processing pipeline
Analysis repo for targeting loops associated with GM12878 and HCT116
Analysis pipeline for the GUIDE-seq assay.
A preprocessing and QC pipeline for HiChIP data
Repository for showing commands and reproducing hichipper analyses
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.