avera1988 Goto Github PK
Name: Arturo Vera-Ponce de Leon
Type: User
Company: NMBU
Twitter: quark_buzo_vera
Arturo Vera-Ponce de Leon's Projects
bioinfows
Data, tips, code and other useful stuff for doing bioinformatics
cog_differential_analysis
Scripts to perform comparative genomic analysis using COG profiles
comparative_genomics
Toolbox for comparative genomics
e.coli_populationstructure
Scripts used for analyzing E. coli population structure wiht GET_HOMOLOGUES and RhierBAPS
gatk-docs
Documentation archive for GATK tools and workflows
genome_assembly_lecture
A lecture for basic genome assembly
genoplottips
Some scripts and tools for using GenoPlot tool on R
hello-world
Just another repository
kegg_parser
R tools for parsing KEGG KO annotation a metabolic pathways
metagenomic_stats
multigenome2blocks
This pipeline give you a concatenated multi alignment of 31 Single Copy Markers from multiple genome assembly for further phylogenetic analysis.
nmbu-bio-326
Genomics and bioinformatics course at NMBU
p.americana_rnaseq
sop
SOP and basic usage of hardware and software for bioinformatics by The Memo group
spiroplasma_ixodetis_dactylopius_rnaseq
Scripts to analyze differential expression analysis of S. ixodetis DCF in Dactylopius coccus gut, ovary and hemolymph
trimgalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
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