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Babelomics

Babelomics is an integrative platform for the analysis of Transcriptomics, Proteomics and Genomics data with advanced functional profiling

This version of Babelomics integrates primary (normalization, calls, etc.) and secondary (signatures, predictors, associations, TDTs, clustering, etc.) analysis tools within an environment that allows relating genomic data and/or interpreting them by means of different functional enrichment or gene set methods. Such interpretation is made using functional definitions, protein-protein interactions...

How to install

    git clone https://github.com/babelomics/babelomics.git
    cd babelomics/babelomics-web/
    bower install
    git submodule update --init
    cd lib/jsorolla/
    bower install

Joaquin Dopazo's Projects

arapathia icon arapathia

AraPathia is the Hiàthia version for Arabidopsis and plant signaling models

bierapp icon bierapp

This interactive tool allows finding genes affected by deleterious variants that segregate along family pedigrees , case-controls or sporadic samples

biertool icon biertool

The new interface for the variant prioritization tool

biodb icon biodb

Databases external to CellBase used by different prioritization tools

cellbase icon cellbase

High-Performance NoSQL database and RESTful web services to access to most relevant biological data

cnvs icon cnvs

Copy Number Variation Server

csvs icon csvs

Population Variant Server

impusars icon impusars

Software tool for the imputation of whole-genome SARS-CoV-2 sequences.

iva icon iva

Interactive Variant Analysis tool, forked from OpenCB https://github.com/opencb/iva, documentation at http://docs.opencb.org/display/iva

jsorolla icon jsorolla

JSorolla is a JavaScript Library for biological and genomic data visualization

metabolizer icon metabolizer

Web tool to analyze transcriptomic (and mutational) data in the context of metabolic pathways

mignon icon mignon

Mechanistic integrative analysis of RNA-Seq data

ngscat2 icon ngscat2

Improved version of Next Generation Sequencing data Capture Assessment Tool (ngsCAT)

opencga icon opencga

An Open Computational Genomics Analysis platform for big data processing and analysis in genomics

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