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adaptive-anti-aliasing

awesome-gan-for-medical-imaging

Awesome GAN for Medical Imaging

bart

BART: Toolbox for Computational Magnetic Resonance Imaging

bm3d

clone of the MATLAB-version BM3D http://www.cs.tut.fi/~foi/GCF-BM3D/

clearswi.jl

improved susceptibility weighted imaging using multi-echo aquisitions

dce-mri-compare

dce_direct_recon

Source codes for "Direct Estimation of Tracer-Kinetic Parameter Maps from Highly Undersampled Brain DCE-MRI", submitted to MRM

deblurring

Deblurring using Dinghui Wang's method in spiral MRI

deep-learning

:computer:深度学习实战：手写数字识别、Discuz验证码识别、垃圾分类、语义分割

deep-mri-reconstruction

Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction: Implementation & Demo

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

dive-into-dl-pytorch

本项目将《动手学深度学习》(Dive into Deep Learning)原书中的MXNet实现改为PyTorch实现。

ecg-ml-dl-algorithm-matlab

Basic Algorithm For Beginners

editer_lowfieldmri

examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

fastmri

A large-scale dataset of both raw MRI measurements and clinical MRI images

gadgetron

Gadgetron - Medical Image Reconstruction Framework

hyperpolarized-mri-toolbox

The goal of this toolbox is to provide open-source research-level and prototyping software tools for hyperpolarized MRI experiments. It is currently based on MATLAB/Octave code, and includes code for designing radiofrequency (RF) pulses, imaging gradients, data reconstruction, and data analysis. doi: 10.5281/zenodo.1198915

image_segmentation

Pytorch implementation of U-Net, R2U-Net, Attention U-Net, and Attention R2U-Net.

invesalius3

3D medical imaging reconstruction software

ismrm-rf-pulse-design-challenge

Scoring codes and examples for the 2016 ISMRM Challenge on RF Pulse Design

ista-net-pytorch

ISTA-Net: Interpretable Optimization-Inspired Deep Network for Image Compressive Sensing, CVPR2018 (PyTorch Code)

jemris

JEMRIS is a versatile, open-source, multi-purpose MRI simulator.

limesdr_workshop

Intro to software-defined radio with LimeSDR workshop

lowfieldsim

medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

ml-visuals

🎨 ML Visuals contains figures and templates which you can reuse and customize to improve your scientific writing.

modl

MoDL: Model-Based Deep Learning Architecture for Inverse Problems

mre-matlab-toolbox

A Matlab toolbox for working with magnetic resonance elastography (MRE) images

mri-noise-cancellation

MRI noise cancellation code