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Name: Bayraktar Group

Type: Organization

Bio: We seek to explore the vast cellular diversity in the human brain using large-scale spatial transcriptomics, imaging and functional screens.

Twitter: bayraktar_lab

Location: Cellular Genetics, Wellcome Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK

Blog: https://www.sanger.ac.uk/group/bayraktar-group/

Bayraktar Group's Projects

cell2fate icon cell2fate

Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.

cell2location icon cell2location

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

countcorrect icon countcorrect

CountCorrect: Background removal for Nanostring WTA data

feature_reg icon feature_reg

Feature based registration for fluorescence microscopy images

image-station icon image-station

Image visualization in a browser with batteries included (mirroring from internal gitlab)

opt_flow_reg icon opt_flow_reg

Optical flow based registration for fluorescence microscopy images

webatlas-pipeline icon webatlas-pipeline

A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas

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