Comments (2)
BBillot
commented on August 18, 2024
Hi,
I noticed this error too, and I have been working to fix it. This is now done and you can have a look at requirements_python3.8.txt for an updated list of dependencies.
You will notice that it has way fewer dependencies than before, since I've been doing a bit of cleaning in the ext/ folder.
Finally, I've added minimal conda/pip commands in the README to install the correct libraries to make SynthSeg work.
Let me know how it goes.
best
benjamin
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BBillot
commented on August 18, 2024
This issue is not entirely a duplicate of #49, but they're kind of related (issue with python 3.8), so I just thought of mentioning it here :)
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Related Issues (20)
- Input shapes at inference HOT 7
- /
- provide bids-app HOT 1
- Run inference directly on the original NIFTI image HOT 2
- CSF label left out of "labels table.txt" HOT 1
- Synthesize image for different anantomical templates HOT 2
- Resampled image is not saved HOT 2
- random segmentation failures HOT 3
- Segmentation Discrepancies Analysis HOT 3
- Clarification on Fine-Tuning with real images HOT 4
- \
- ValueError: Error when checking input: expected labels_input to have 4 dimensions, but got array with shape (1, 216, 256, 8, 1) HOT 1
- Clarification on GMM sampling HOT 1
- InvalidArgumentError: 4D Input Expected with SynthSeg_predict.py on MacOS M2 HOT 7
- insula subsegmentation HOT 2
- Error while following the training example HOT 6
- synthseg-robust 2.0 HOT 1
- lab2im version errors HOT 2
- Force resampling HOT 1
- Tutorial for re-training SynthSeg on non-brain datasets HOT 1
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