biapol Goto Github PK

.github

annotation-in-3d-blogpost

This repository hosts a proposal for an annotation template for community annotations

biaplotter

A base napari plotter widget for interactive plotting

biapol-taurus

biapol-utilities

Collection of utility functions from the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence "Physics of Life", TU Dresden, Dresden, Germany

biapol.github.io

bio-image_analysis_with_python

Lecture materials "Bio-image analysis, biostatistics, programming and machine learning for computational biology" at the Center of Molecular and Cellular Bioengineering (CMCB) / University of Technology, TU Dresden

blog

Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at the TU Dresden. We blog about image data science, knowledge exchange and research data management in the life sciences.

blog-1

Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at the TU Dresden. We blog about image data science, knowledge exchange and research data management in the life sciences.

cci_gothenburg_imagej_macro_course_2021

cookiecutter-napari-plugin

Cookiecutter for napari plugins

digs-bb_lm_course_bio-image_analysis_2022

digs-bb_lm_course_bio-image_analysis_2023

This repository contains a collection of Python Jupyter notebooks for a one afternoon course in Image Analysis using Python and Napari.

docker-example-omero

OMERO Docker compose example

example-repo-sphinx

Example repository to demonstrate automated documentation with Sphinx.

fileserver-to-hpc

Monitors a folder and automatically processes new subdirectories on an HPC cluster.

guanine-crystal-analysis

A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye

hackathon-london-2022-11

Collection of code from the CLIJ-CZI-EOSS hackathon at the Francis Crick Institute in Londin

hip_introduction_to_napari_and_image_processing_with_python_2022

hip_summer_school_image_data_visualization_101

image-data-science-with-python-and-napari-epfl2022

imagej-macro-cheat-sheet

learning-groups-2022

Online material from BiA-PoL learning groups 2022

microscope-gym

An open python smart-microscopy API

napari-clusters-plotter

A napari plugin for clustering objects according to their properties.

napari-clusters-plotter-example-notebooks

This repository hosts jupyter notebooks with examples of napari-clusters-plotter usage

napari-crop

napari-polo

A napari Plugin for Polarised Light Microscopy Analysis

on_the_fly_image_processing_napari

pasteur-neubias-training-school-on-bioimage-analysis

Training school focused on Bioimage Analysis. Home page: https://research.pasteur.fr/en/course/neubias-pasteur-course-on-bioimage-analysis/