Support for the hierarchical rule is missing about spm HOT 12 CLOSED

Thanks for the report. I fixed the bug in the SPM12 repository and will rebuild the Docker container shortly. When this is done, is there a way to restart the SPM analysis on OpenNeuro?

PS: On the OpenNeuro page, there is a link to OSF in the "References and Links":
https://osf.io/x32te/
and from there a link back to OpenNeuro:
https://openneuro.org/datasets/ds001105
but you get "You are not authorized to view this dataset" as only this one works:
https://openneuro.org/datasets/ds001105/versions/00001

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Thanks for fixing this! If you publish a new version of SPM App on GitHub I will be able to deploy it on OpenNeuro and we will be able to submit a new job.

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v0.0.10 has landed. Thanks!

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Also - should I enable group level?

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I have added an example of a task at the group level (computing a mean structural image) so you can enable it.

The '--config' input argument allows to specify the path to a MATLAB script that contains a description of the task to perform at the participant or group level. See examples with the configuration files pipeline_participant.m and pipeline_group.m that are used by default, when the '--config' argument is not specified.

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Yes, the way I thought about it is to have a different configuration file per level of analysis - it kind of makes sense given that analyses are always different. That said, a single user-specified configuration file could be written like this:

if strcmp(BIDS_App.level,'participant')
    % first level analysis
else
    % second level analysis
end

so this is not a limitation for OpenNeuro.
I could also add the option for '--config' to point to a folder (instead of a single file) that would contain configuration files for each level of analysis, and would be picked up appropriately automatically by the App.

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I have added a paragraph about the configuration file in the README:
https://github.com/BIDS-Apps/SPM#configuration-file

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Will do, thanks!

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