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Lab-BioPro's Projects

clean-alignment icon clean-alignment

clean-alignment: a new tool to clean and remove outliers from multiple sequence alignment

covira icon covira

CoVIRA: Consensus by Voting with Iterative Re-weighting based on Agreement

cs2q.py icon cs2q.py

A simple tool to convert color-space FASTA files to FASTQ format

genix icon genix

An automated pipeline for bacterial genome annotation

getani icon getani

A simple script to compute pairwise average nucleotide identity (ANI) for a set of genomes sequences

targetale icon targetale

A web tool to map TALE genes in the genome X. oryzae strains and their potential targets in O. sativa

transcriptx icon transcriptx

autommated annotation pipeline for whole-transcriptome assemblies

x.oryzae-pangenomic-analysis icon x.oryzae-pangenomic-analysis

A pangenomic analysis of the X. oryzae patovars oryzae and oryzicola as a tool to identify pathovar-specific adaptations

x_oryzae_pangenome icon x_oryzae_pangenome

A comparative genomics analysis of the X. oryzae patovars oryzae and oryzicola.

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